ksrates
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K
S
rate-adjustment
Installation
Usage
Input and output description
Configuration files
Mixture modeling of paralog
K
S
distributions
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ksrates
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ksrates
Welcome to
ksrates
documentation!
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Welcome to
ksrates
documentation!
K
S
rate-adjustment
Substitution rate-adjustment strategy in a nutshell
Explained example
Installation
Nextflow (recommended)
Singularity and Docker containers
Manual installation
Testing your installation
Updating your installation
Usage
Run example case as a Nextflow pipeline (recommended)
Run example case as a manual pipeline
Practical considerations
Input and output description
Input files
Output files and directory organization
Note on
wgd
output files
Configuration files
ksrates
configuration file
Nextflow configuration file
Expert configuration file
Mixture modeling of paralog
K
S
distributions
Anchor
K
S
clustering
Exponential-lognormal mixture model
Lognormal mixture model
FAQs about
ksrates
Nextflow
Containers
General errors and warnings
Configuration
How to cite us
Read the Docs
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